T-COFFEE, Version_11.00.8cbe486 (2014-08-12 22:05:29 - Revision 8cbe486 - Build 477)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=1000
*
 BAD AVG GOOD
*
Brassica_rapa     : 100
Euphorbia_heter   : 100
Amaranthus_rudi   : 100
Amaranthus_chlo   : 100
Amaranthus_grae   : 100
Amaranthus_viri   : 100
Amaranthus_palm   : 100
Amaranthus_spin   : 100
Amaranthus_hybr   : 100
Amaranthus_livi   : 100
Amaranthus_thun   : 100
Amaranthus_albu   : 100
Conyza_canadens   : 100
Ambrosia_trifid   : 100
Digitaria_sangu   : 100
Glycine_max       : 100
Commelina_diffu   : 100
Oryza_sativa      : 100
Zea_mays          : 100
Nicotiana_tabac   : 100
Alnus_glutinosa   : 100
Arabidopsis_tha   : 100
Kochia_scoparia   : 100
Chenopodium_alb   : 100
Abutilon_theoph   : 100
Convolvulus_arv   : 100
Lolium_perenne    : 100
Lolium_multiflo   : 100
cons              : 100

Brassica_rapa     MAQILAASPTCQMRLTK---PSSIASSKLWNSVVLKQKEQSSSKVRS-FKVMA-LQSDNSTIN
Euphorbia_heter   MAQILAPCAQLQMRVPKNSTPASPLSTKMWSSLFLKQNKKSTARNTSKLRVYA-VKSESGTIN
Amaranthus_rudi   --------------------------------------------MSSKFRVCASLKSENGTVN
Amaranthus_chlo   MAQILAPYMQCQMKFSKG--STSSMTSNPWTSIFLKENKKGSIKCSSKFRVCASLQSENSTIN
Amaranthus_grae   MAQILAPNMQCQMKFSKV--STSSMTLSPWTSIFLKENQKKSIKCSSKFRVCASLKSENSTVN
Amaranthus_viri   MAQILAPNMQCQMKFSKG--STSSMTLSPWTSIFLKENQKKSIKCSSKFRVCASLKSENSTVN
Amaranthus_palm   MAQILAPYMQCQMKFSKG--STSSMTSNPWTSIFLKENKKGSIKCSSKFRVCASLQSDNSTVN
Amaranthus_spin   MAQILAPYMQCQMKFSKG--STSSMTSNPWTSIFLKENKKGSIKCSSKFRVCASLQSDNSTVN
Amaranthus_hybr   MAQILAPYMQCQMKFSKG--STSSMTSNPWTSIFLKENKKGSIKCSSKFRVCASLQSENSTIN
Amaranthus_livi   MAQILAPYMQCQMKFSKG--STSSMTSNPWTSIFLKENKKGSIKCSSKFRVCASLQSENSTIN
Amaranthus_thun   MAQILAPYMQCQMKFSKG--STSSMTSNPWTSIFLKENKKGSIKCSSKFRVCASLQSENSTIN
Amaranthus_albu   MAQILAPYMQCQLKFSKG--STSSMTSNPWTSIFLKENKKGSIKCSSKFRVCASLQSENSTIN
Conyza_canadens   MAQCLAPSVQWQMRLTKNGMESSSMSSKMWNSLSLKQSKKGALKNATKFSICA---SANGTIN
Ambrosia_trifid   MAQCLAPSVQWQMRLTRSSMETSSMTSKMWNSFSLKQSKKGALKTSTKFRICA---SSNGTIN
Digitaria_sangu   MAQCLAPSVQWQMRVTKNAMEPNSMTSKMFNSFALKPSKKGAMKTSTKFRICA---SASGTIN
Glycine_max       -------------------------------------------------------------MS
Commelina_diffu   ---------------------------------------------------------------
Oryza_sativa      -------------------------------------------------------------MA
Zea_mays          -------------------------------------------------------------MA
Nicotiana_tabac   -------------------------------------------------------------MA
Alnus_glutinosa   -------------------------------------------------------------MS
Arabidopsis_tha   -------------------------------------------------------------MS
Kochia_scoparia   -------------------------------------------------------------MS
Chenopodium_alb   -------------------------------------------------------------MS
Abutilon_theoph   -------------------------------------------------------------ML
Convolvulus_arv   ---------------------------------------------------------------
Lolium_perenne    -------------------------------------------------------------MA
Lolium_multiflo   -------------------------------------------------------------MA

cons                                                                             


Brassica_rapa     RVESLLNLDTKPFTDRIIAE-------YIWIGGSGIDLRSKSRTLEKPVEDPSELPKWNYDGS
Euphorbia_heter   RLEDLLNLDITPYTDKIIAE-------YIWIGGTGVDVRSKSRTISKPVEHPSELPKWNYDGS
Amaranthus_rudi   RVEQLLNLDVTPYTDKIIAE-------YIWIGGSGIDVRSKSRTISKPVEHPSELPKWNYDGS
Amaranthus_chlo   RVEQLLNLDVTPYTDKIIAE-------YIWIGGSGIDVRSKSRTISKPVEHPSELPKWNYDGS
Amaranthus_grae   RVEQLLNLDVTPYTDKIIAE-------YIWIGGSGIDVRSKSRTISKPVEHPSELPKWNYDGS
Amaranthus_viri   RVEQLLNLDVTPYTDKIIAE-------YIWIGGSGIDVRSKSRTISKPVEHPSELPKWNYDGS
Amaranthus_palm   RVEQLLNLDVTPYTDKIIAE-------YIWIGGSGIDVRSKSRTISKPVEHPSELPKWNYDGS
Amaranthus_spin   RVEQLLNLDVTPYTDKIIAE-------YIWIGGSGIDVRSKSRTISKPVEHPSELPKWNYDGS
Amaranthus_hybr   RVEQLLNLDVTPYTDKIIAE-------YIWIGGSGIDVRSKSRTISKPVEHPSELPKWNYDGS
Amaranthus_livi   RVEQLLNLDVTPYTDKIIAE-------YIWIGGSGIDVRSKSRTISKPVEHPSELPKWNYDGS
Amaranthus_thun   RVEQLLNLDVTPYTDKIIAE-------YIWIGGSGIDVRSKSRTISKPVEHPSELPKWNYDGS
Amaranthus_albu   RVEQLLNLDVTPYTDKIIAE-------YIWIGGSGIDVRSKSRTISKPVEHPSELPKWNYDGS
Conyza_canadens   RMEDLLNLDVTPYTNKIIAE-------YIWIGGSGTDVRSKSRTLSKPVEHPSELPKWNYDGS
Ambrosia_trifid   RMEDLLNLDVSPYTDKIIAE-------YIWIGGSGTDVRSKSRTISKAVEHPSELPKWNYDGS
Digitaria_sangu   RMEDLLNLDVTPYTDKIIAE-------YIWIGGSGTDVRSKSRTISKPVEHASELPKWNYDGS
Glycine_max       LLSDLINLNLSDITDKVIAE-------YIWVGGSGMDMRSKARTLSGLVNDPSALPKWNYDGS
Commelina_diffu   ----MLNLEHYFSAQRTFTKVQYNFNGHTLIGGTGIDLRSKSRTISKPVEHPSELPKWNYDGS
Oryza_sativa      NLTDLVNLNLSDCSDKIIAE-------YIWVGGSGIDLRSKARTVKGPITDVSQLPKWNYDGS
Zea_mays          SLTDLVNLDLSDCTDRIIAE-------YIWIGGTGIDLRSKARTVKGPITDPIQLPKWNYDGS
Nicotiana_tabac   HLSDLVNLNLSDSTQKIIAE-------YIWIGGSGMDVRSKARTLSGPVDDPSKLPKWNYDGS
Alnus_glutinosa   LLSDLINLNLSDATDKVIAE-------YIWIGGSGTDLRSKARTLTGPVNHPSKLPKWNYDGS
Arabidopsis_tha   LLADLVNLDISDNSEKIIAE-------YIWVGGSGMDMRSKARTLPGPVTDPSKLPKWNYDGS
Kochia_scoparia   LLSDLINLDLSDSTDKIIAE-------YIWIGGSGMDMRSKARTLEGPVSDPKKLPKWNYDGS
Chenopodium_alb   LLSDLVNINLSDSTDKVIAE-------YIWIGGSGMDMRSKARTLNGPVSDPKELPKWNYDGS
Abutilon_theoph   LLNDLINLDLTETTEKIIAE-------YIWIGGSGMDLRSKARTLPGPVSDPAKLPKWNYDGS
Convolvulus_arv   ---------------------------------------------------------------
Lolium_perenne    LLTDLLNLDLSGSTEKIIAE-------YIWIGGSGMDLRSKARTLPGPVSDPSKLPKWNYDGS
Lolium_multiflo   LLTDLLNLDLSGSTEKIIAE-------YIWIGGSGMDLRSKARTLPGPVSDPSKLPKWNYDGS

cons                                                                             


Brassica_rapa     STGQAPGEDSEVILYPQAIFRDPFRGGNNIL---------VICDTYTPAGEPIPTNKRARAAE
Euphorbia_heter   STGQAPGEDSEVILYPQAIFKDPFRGGNNIL---------VICDAYTPAGEPIPTNKRHRAAE
Amaranthus_rudi   STGQAPGEDSEVILYPQAIFKDPFRGGNNIL---------VICDTYTPAGEPIPTNKRYRAAQ
Amaranthus_chlo   STGQAPGEDSEVILYPQAIFKDPFRGGNNIL---------VICDTYTPXXXXXXXXXXYRAAQ
Amaranthus_grae   STGQAPGEDSEVILYPQAIFKDPFRGGNNIL---------VICDTYTPAGEPIPTNKRYRAAQ
Amaranthus_viri   STGQAPGEDSEVILYPQAIFKDPFRGGNNIL---------VICDTYTPAGEPIPTNKRYRAAQ
Amaranthus_palm   STGQAPGEDSEVILYPQAIFKDPFRGGNNIL---------VICDTYTPAGEPIPTNKRYRAAQ
Amaranthus_spin   STGQAPGEDSEVILYPQAIFKDPFRGGNNIL---------VICDTYTPAGEPIPTNKRYRAAQ
Amaranthus_hybr   STGQAPGEDSEVILYPQAIFKDPFRGGNNIL---------VICDTYTPAGEPIPTNKRYRAAQ
Amaranthus_livi   STGQAPGEDSEVILYPQAIFKDPFRGGNNIL---------VICDTYTPAGEPIPTNKRYRAAQ
Amaranthus_thun   STGQAPGEDSEVILYPQAIFKDPFRGGNNIL---------VICDTYTPAGEPIPTNKRYRAAQ
Amaranthus_albu   STGQAPGEDSEVILYPQAIFKDPFRGGNNIL---------VICDTYTPAGEPIPTNKRYRAAQ
Conyza_canadens   STGQAPGEDSEVILYPQAIFKDPFRGGNNIL---------VICDAYTPQGEPIPTNKRAKAAE
Ambrosia_trifid   STGQAPGEDSEVILYPQAIFKDPFRGGNNIL---------VICDTYTPQGEPIPTNKRAKAAE
Digitaria_sangu   STGQAPGEDSEVILYPQAIFKDPFRGGNNIL---------VICDAYTPQGEPIPTNKRAKAAE
Glycine_max       STGQAPGEDSEVI-YIHKQFRDPFRRGNNIL---------VMCDAYTPAGEPIPTNKRNKAAK
Commelina_diffu   STGQAPGEDSEVIL-PQAIFKDPFRGGNHIL---------VICDTYTPAGEPIPTNKRHRAAQ
Oryza_sativa      STGQAPGEDSEVILYPQAIFKDPFRRGDNIL---------VMCDCYTPQGEPIPTNKRHSAAK
Zea_mays          STGQAPGEDSEVILYPQAIFKDPFRKGNHIL---------VMCDCYTPQGEPIPTNKRYSAAK
Nicotiana_tabac   STGQAPGEDSEEILYPQAIFKDPFRRGNNIL---------VICDCYTPAGEPIPTNKRHSAAK
Alnus_glutinosa   STGQAPGEDSEVIYILRQFFKDPFRRGNNIL---------VICDTYTPAGEPIPTNKRHGAAK
Arabidopsis_tha   STGQAPGQDSEVILYPQAIFKDPFRRGNNILINVFYRFDQVMCDAYTPAGEPIPTNKRHAAAE
Kochia_scoparia   STGQAPGEDSEVILYPQAIFRDPFRRGNNIL---------VMCDAYTPQGEPIPTNNRCNAEK
Chenopodium_alb   STGQAPGEDSEVILYPQAIFKDPFRRGNNIL---------VMCDAYTPQGEPIPTNKRHDAAK
Abutilon_theoph   STNQAPGDDSEVILYPQAIFKDPFRRGNNIL---------VMCDAYTPAGEPIPTNKRYNAAK
Convolvulus_arv   ---------------------------------------------------------------
Lolium_perenne    STGQAPGEDSEVILYPQAIFKDPFRRGNNIL---------VMCDCYTPAGEPIPTNKRNAAAK
Lolium_multiflo   STGQAPGEDSEVILYPQAIFKDPFRRGNNIL---------VMCDCYTPAGEPIPTNKRNAAAK

cons                                                                             


Brassica_rapa     IFSNKKVNEEIPWFGIEQEYTLLQPNVNWPLGWPVGAYPGPQGPYYCGVGAEKSWGRDISDAH
Euphorbia_heter   IFSNQKVIDEVPWYGIEQEYTLLQTNVNWPLGWPVGGYPGPQGPYYCAAGADKSFGRDISDAH
Amaranthus_rudi   IFSDPKVVSEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDISDAH
Amaranthus_chlo   IFSDPKVVSEIPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDISDAH
Amaranthus_grae   IFSDPKVVSEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDISDAH
Amaranthus_viri   IFSDPKVVSEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDISDAH
Amaranthus_palm   IFSDPKVVSEIPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDISDAH
Amaranthus_spin   IFSDPKVVSEIPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDISDAH
Amaranthus_hybr   IFSDPKVVSEIPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDISDAH
Amaranthus_livi   IFSDPKVVSEIPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDISDAH
Amaranthus_thun   IFSDPKVVSEIPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDISDAH
Amaranthus_albu   IFSDPKVVSEIPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDISDAH
Conyza_canadens   IFSNPKVVSQVPWFGIEQEYTLLQTDVKWPLGWPVGGYPGPQGPYYCGAGADKSFGRDISDAH
Ambrosia_trifid   IFSDPKVVDQVPWFGIEQEYTLLQPNVNWPLGWPTGGYPGPQGPYYCGAGADKSFGRDISDAH
Digitaria_sangu   IFSDPKVVEQVPWFGIEQEYTLLQPNVKWPLGWPVGGYPGPQGPYYCGAGADKSFGRDISDAH
Glycine_max       IFIHPDVAAEEPWYGLEQEYTLLQKDVQWPLGWPLGGFLGPQGPYYCGTGANKAFGRDIVDSH
Commelina_diffu   IFSDKKVVDEVPWFGIEQEYTLLQTNVNWPLGWPVGGYPGPQGPYYCAVGADKSFGRDISDAH
Oryza_sativa      IFSHPDVVAEVPWYGIEQEYTLLQKDVNWPLGWPVGGFPGPQGPYYCAAGAEKAFGRDIVDAH
Zea_mays          VFSHPDVAAEVPWYGIEQEYTLLQKDVSWPLGWPVGGYPGPQGPYYCAAGADKAFGRDVVDAH
Nicotiana_tabac   IFSHPDVVVEEPWYGLEQEYTLLQKDINWPLGWPLGGFPGPQGPYYCGIGAGKVFGRDIVDSH
Alnus_glutinosa   IFSHPEVVAEVPWYGIEQEYTLLQKDVKWPLGWPVGGYPGPQGPYYCGIGADKAWGRDIVDAH
Arabidopsis_tha   IFANPDVIAEVPWYGIEQEYTLLQKDVNWPLGWPIGGFPGPQGPYYCSIGADKSFGRDIVDAH
Kochia_scoparia   IFSNPEVAAEVPWYGIEQEYTLLQKDVNWPVGWPLGGFPGPQGPYYCGVGADKAFGRDIVDSH
Chenopodium_alb   IFSHPGVAAXVPWYGIEQEYTLLQKDVNWPIGWPVGGFPGPQGPYYCGIGADKAFGRDIVDSH
Abutilon_theoph   IFSNPDVVAEEPWYGIEQEYTLLQKDTKWPLGWPVGGFPGPQGPYYCGVGADKSFGRDIVDSH
Convolvulus_arv   ------------------EYTLLQKDVNWPLGWPAGGYPGPQGPYYCGIGADKAFGRDIVDSH
Lolium_perenne    IFSNPAVAAEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCSIGAEKSFGRDIVDSH
Lolium_multiflo   IFSNPAVAAEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCSIGAEKSFGRDIVDSH

cons                                ****** : .**:*** *.: ********. ** * :***: *:*


Brassica_rapa     YKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHVWCARYLLERITEQAGVVLTLDPKP
Euphorbia_heter   YKACLYAGINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWCSRYILERITEQAGVVLTLDPKP
Amaranthus_rudi   YKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCARYILERITEQAGVVLTLDPKP
Amaranthus_chlo   YKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCARYILERITEQAGVVLTLDPKP
Amaranthus_grae   YKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCARYILERITEQAGVVLTLDPKP
Amaranthus_viri   YKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCARYILERITEQAGVVLTLDPKP
Amaranthus_palm   YKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCARYILERITEQAGVVLTLDPKP
Amaranthus_spin   YKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCARYILERITEQAGVVLTLDPKP
Amaranthus_hybr   YKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCARYILERITEQAGVVLTLDPKP
Amaranthus_livi   YKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCARYILERITEQAGVVLTLDPKP
Amaranthus_thun   YKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCARYILERITEQAGVVLTLDPKP
Amaranthus_albu   YKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCARYILERITEQAGVVLTLDPKP
Conyza_canadens   YKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCARYLLERITEQAGVVLTLDPKP
Ambrosia_trifid   YKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCARYLLERITEQAGVVLTLDPKP
Digitaria_sangu   YKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCARYLLERITEQAGVVLTLDPKP
Glycine_max       YKACIYAGFNISGINGEVMPGQWGFQVGPSVGISAADELWVARYILERITEIAGLVLSFDPKP
Commelina_diffu   YKACLYAGINISGTNGEVMPGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Oryza_sativa      YKACIYAGINISGINGEVMPGQWEFQVGPSVGIAAADQVWVARYILERVTEVAGVVLSLDPKP
Zea_mays          YKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWVARYILERITEMAGIVLSLDPKP
Nicotiana_tabac   YKACLYAGINISGINGEVMPGQWEFQVGPSVGISAADELWAARYILERITEIAGVVVSFDPKP
Alnus_glutinosa   YKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDEVWAARYILERITEIAGVVLSLDPKP
Arabidopsis_tha   YKASLYAGINISGINGEVMPGQWEFQVGPSVGISAADEIWIARYILERITEIAGVVVSFDPKP
Kochia_scoparia   YKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDELWVARYILERITEVAGVALSFDPKP
Chenopodium_alb   YKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDELWVARYILERITEIAGVALSFDPKP
Abutilon_theoph   YKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQVWMARYILERITEIAGVVLSFDPKP
Convolvulus_arv   YKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDEVWVARYILERISEIAGVVVSFDPKP
Lolium_perenne    YKACLFAGINISGINGEVMPGQWEFQVGPSVGISAGDQVWVARYILERITEIAGVVVTFDPKP
Lolium_multiflo   YKACLFAGINISGINGEVMPGQWEFQVGPSVGISAGDQVWVARYILERITEIAGVVVTFDPKP

cons              ***.::**:**** ********                                         


Brassica_rapa     IEGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHMEHISAYGEGNERRLTGKHETASI
Euphorbia_heter   IEGDWNGAGCHTNYSTKSMREEGGFEVIKKAILNLSLRHKDHISAYGEGNERRLTGKHETASI
Amaranthus_rudi   IEGDWNGAGCHTNYSTKTMREDGGYEAIKKAILNLSLRHKDHISAYGEGNERRLTGKHETASI
Amaranthus_chlo   IEGDWNGAGCHTNYSTKTMREDGGYEAIKKAILNLSLRHKDHISAYGEGNERRLTGKHETASI
Amaranthus_grae   IEGDWNGAGCHTNYSTKTMREDGGYEAIKKAILNLSLRHKDHISAYGEGNERRLTGKHETASI
Amaranthus_viri   IEGDWNGAGCHTNYSTKTMREDGGYEAIKKAILNLSLRHKDHISAYGEGNERRLTGKHETASI
Amaranthus_palm   IEGDWNGAGCHTNYSTKTMREDGGYEAIKKAILNLSLRHKDHISAYGEGNERRLTGKHETASI
Amaranthus_spin   IEGDWNGAGCHTNYSTKTMREDGGYEAIKKAILNLSLRHKDHISAYGEGNERRLTGKHETASI
Amaranthus_hybr   IEGDWNGAGCHTNYSTKTMREDGGYEAIKKAILNLSLRHKDHISAYGEGNERRLTGKHETASI
Amaranthus_livi   IEGDWNGAGCHTNYSTKTMREDGGYEAIKKAILNLSLRHKDHISAYGEGNERRLTGKHETASI
Amaranthus_thun   IEGDWNGAGCHTNYSTKTMREDGGYEAIKKAILNLSLRHKDHISAYGEGNERRLTGKHETASI
Amaranthus_albu   IEGDWNGAGCHTNYSTKTMREDGGYEAIKKAILNLSLRHKDHISAYGEGNERRLTGKHETASI
Conyza_canadens   IDGDWNGAGCHTNYSTLAMREEGGFEVIKKAILNLSLRHTEHISAYGEGNERRLTGKHETASI
Ambrosia_trifid   IEGDWNGAGCHTNYSTKAMREEGGFEVIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASI
Digitaria_sangu   IEGDWNGAGCHTNYSTKAMREEGGFEVIKKAILNLSLRHTEHISAYGEGNERRLTGKHETASI
Glycine_max       IQGDWNGPGAHTNYSTKLMRDDGGYEIIKKAIAKLEKRHKEHIAAYGEGNERRLTGPDETADM
Commelina_diffu   XXXXXXXXXXXXXXSTKSMREEGGFEVIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASI
Oryza_sativa      IPGDWNGAGAHTNFSTKSMREPGGYEVIKKAIDKLALRHKEHIAAYGEGNERRLTGRHETADI
Zea_mays          IKGDWNGAGAHTNYSTKSMREAGGYEVIKAAIDKLGKRHKEHIAAYGEGNERRLTGRHETADI
Nicotiana_tabac   IPGDWNGAGAHTNYSTKSMRNEGGYEVIKKAIENLGLRHKEHIAAYGEGNERRLTGRHETADI
Alnus_glutinosa   IQGDWNGAGAHTNYSTKSMRNNGGYEIIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETADI
Arabidopsis_tha   IPGDWNGAGAHTNYSTKSMREEGGYEIIKKAIEKLGLRHKEHISAYGEGNERRLTGHHETADI
Kochia_scoparia   IPGDWNGAGAHTNYSTKSMREDGGYEVIKKAIEKLGLKHAEHISAYGEGNERRLTGKHETASI
Chenopodium_alb   IPGDWNGAGAHTNYSTKSMREDGGYEIIKQAIEKLGLRHKEHIAAYGEGNERRLTGKHETASI
Abutilon_theoph   IPGDWNGAGAHTNYSTKSMRNDGGIKVIKEAIEKLGKRHKEHIAAYGEGNERRLTGRHETADI
Convolvulus_arv   IPGDWNGAGAHTNYSTKSMRNEGGFEVIKKAIAKLQVRHKEHIAAYGEGNERRLTGKHETADI
Lolium_perenne    IPGDWNGAGAHTNYSTESMRKDGGFEVIVAAVEKLKLRHKEHIAAYGEGNERRLTGKHETADI
Lolium_multiflo   IPGDWNGAGAHTNYSTESMR-------------------------------------------

cons                            **  **                                           


Brassica_rapa     DQFSWGVANRGCSIRVGRDTEKKGKGYLEDRRPASNMDPYIVTSLLAETTLLWEP-TLEAEAL
Euphorbia_heter   DSFSWGVANRGCSIRVGRDTEKNGKGYLEDRRPASNMDPYVVTSLLAETTLLWEP-TLEAEAL
Amaranthus_rudi   DT-SLGVLPIVVALSV----------WVVTRKRQAKV-IWKIGGLPQTWTHTWQVCSQKLQYF
Amaranthus_chlo   DTFSWGVANRGCSIRVGRDTEKAGKGYLEDRRPASNMDPYVVTGLLAETTILWEP-TLEAEAL
Amaranthus_grae   DTFSWGVANRGCSIRVGRDTEKAGKGYLEDRRPASNMDPYVVTGLLAETTILWEP-TLEAESL
Amaranthus_viri   DTFSWGVANRGCSIRVGRDTEKAGKGYLEDRRPASNMDPYVVTGLLAETTILWEP-TLEAEAL
Amaranthus_palm   DTFSWGVANRGCSIRVGRDTEKAGKGYLEDRRPASNMDPYVVTGLLAETTILWEP-TLEAEAL
Amaranthus_spin   DTFSWGVANRGCSIRVGRDTEKAGKGYLEDRRPASNMDPYVVTGLLAETTILWEP-TLEAEAL
Amaranthus_hybr   DTFSWGVANRGCSIRVGRDTEKAGKGYLEDRRPASNMDPYVVTGLLAETTILWEP-TLEAEAL
Amaranthus_livi   DTFSWGVANRGCSIRVGRDTEKAGKGYLEDRRPASNMDPYVVTGLLAETTILWEP-TLEAEAL
Amaranthus_thun   DTFSWGVANRGCSIRVGRDTEKAGKGYLEDRRPASNMDPYVVTGLLAETTILWEP-TLEAEAL
Amaranthus_albu   DTFSWGVANRGCSIRVGRDTEKAGKGYLEDRRPASNMDPYVVTGLLAETTILWEP-TLEAEAL
Conyza_canadens   NQFSWGVANRGCSIRVGRDTEREGKGYLEDRRPASNMDPYTVTGLLAETTILWEP-TLEAEAL
Ambrosia_trifid   NQFSWGVANRGCSIRVGRDTEKAGKGYLEDRRPASNMDPYTVTGLLAETTILWEP-SLEAEAL
Digitaria_sangu   NQFSWGVANRGCSIRVGRDTEKAGKGYLEDRRPASNMDPYTVTGLLAETTILWEP-TLEAEAL
Glycine_max       NTFLWGVANRGASVRVGRQTLKAGKGYFEERRPASNMDPYVVTSMIADTTILWKP--------
Commelina_diffu   NTFSWGVANRGCSIRVGRDTEKEGKGMELKLRD------------------------------
Oryza_sativa      NTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTGMIAETTLLWKQN-------
Zea_mays          NTFKWGVANRGASIRVGRDTEREGKGYFEDRRPASNMDPYVVTGMIAETTILWNGN-------
Nicotiana_tabac   NTFKWGVANRGASIRVGRDTEREGKGYFEDRRPASNMDPFVVTSMIAETTILSEP--------
Alnus_glutinosa   NTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTLLWKP--------
Arabidopsis_tha   NTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTLLWNP--------
Kochia_scoparia   STFLW----------------------------------------------------------
Chenopodium_alb   STFLWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP--------
Abutilon_theoph   NTFSWGVANRGASIRVGRDTDKDGKGYFEDRRPASNMDPYVVTSMIAETTIIWKP--------
Convolvulus_arv   NTFSWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYTVTSMIAETTILNKD--------
Lolium_perenne    HTFSWGVANRGASIRVGRETEQNGKGYFEDRRPASNMDPYVVTAMIADTTLLWK---------
Lolium_multiflo   ---------------------------------------------------------------

cons                                                                             


Brassica_rapa     AAQKLSLKV---------
Euphorbia_heter   AAQKLSLKV---------
Amaranthus_rudi   GNQHLRLRHQPKNSLLMC
Amaranthus_chlo   AAQKLALNV---------
Amaranthus_grae   AAQKLALNV---------
Amaranthus_viri   AAQKLALNV---------
Amaranthus_palm   AAQKLALNV---------
Amaranthus_spin   AAQKLALNV---------
Amaranthus_hybr   AAQKLALNV---------
Amaranthus_livi   AAQKLALNV---------
Amaranthus_thun   AAQKLALNV---------
Amaranthus_albu   AAQKLALNV---------
Conyza_canadens   AAQKLALNV---------
Ambrosia_trifid   AAQKLALNV---------
Digitaria_sangu   AAQKLALNV---------
Glycine_max       ------------------
Commelina_diffu   ------------------
Oryza_sativa      ------------------
Zea_mays          ------------------
Nicotiana_tabac   ------------------
Alnus_glutinosa   ------------------
Arabidopsis_tha   ------------------
Kochia_scoparia   ------------------
Chenopodium_alb   ------------------
Abutilon_theoph   ------------------
Convolvulus_arv   ------------------
Lolium_perenne    ------------------
Lolium_multiflo   ------------------

cons